This function retrieves all tissues in the eQTL database.
get_eqtl_tissues( species_name = "homo_sapiens", verbose = FALSE, warnings = TRUE, progress_bar = TRUE )
| species_name | The species name, i.e., the scientific name, all letters
lowercase and space replaced by underscore. Currently, only human
|
|---|---|
| verbose | Whether to be verbose about the http requests and respective responses' status. |
| warnings | Whether to show warnings. |
| progress_bar | Whether to show a progress bar. |
get_eqtl_tissues() makes GET requests to
/eqtl/tissue/:species/.
get_eqtl_tissues()#> # A tibble: 44 × 2 #> species_name tissue #> <chr> <chr> #> 1 homo_sapiens Adipose_Subcutaneous #> 2 homo_sapiens Adipose_Visceral_Omentum #> 3 homo_sapiens Adrenal_Gland #> 4 homo_sapiens Artery_Aorta #> 5 homo_sapiens Artery_Coronary #> 6 homo_sapiens Artery_Tibial #> 7 homo_sapiens Brain_Anterior_cingulate_cortex_BA24 #> 8 homo_sapiens Brain_Caudate_basal_ganglia #> 9 homo_sapiens Brain_Cerebellar_Hemisphere #> 10 homo_sapiens Brain_Cerebellum #> # … with 34 more rows