Skip to contents

Import pairs of DAE and DAEQTL candidate SNPs

Source: R/read_snp_pairs.R
read_snp_pairs.Rd

This function reads in a table of pairs of SNPs from a CSV file: the DAE SNP and candidate DAEQTL SNP. One pair per row. The file must have a header with the columns:

  • dae_snp: the DAE SNP.

  • candidate_snp: the candidate DAEQTL SNP.

  • chromosome: the chromosome where the pair is located.

  • dae_snp_position: the DAE SNP position on the chromosome.

  • candidate_snp_position: the candidate DAEQTL SNP position on the chromosome.

Usage

read_snp_pairs(file, ...)

Arguments

file

A path to a file.

...

Extra arguments to be passed on to data.table::fread().

Value

A data frame.

See also

create_snp_pairs()